Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25277-201ENSMUST00000157266 324 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.48□□□□□ -1.69
Sdc1P18828 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm9671-201ENSMUST00000171502 547 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.48□□□□□ -1.69
Sdc1P18828 Ighv8-15-201ENSMUST00000197770 294 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm42804-201ENSMUST00000199701 178 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm8319-201ENSMUST00000205708 641 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm45700-201ENSMUST00000205866 347 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm7943-201ENSMUST00000212078 1034 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm9472-201ENSMUST00000221625 526 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 AC170810.1-201ENSMUST00000228267 672 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Sdc1P18828 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sdc1P18828 Snord65-201ENSMUST00000104269 72 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.47□□□□□ -1.69
Sdc1P18828 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm14472-201ENSMUST00000119815 282 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm17907-201ENSMUST00000173150 710 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm21399-201ENSMUST00000180210 597 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm28006-201ENSMUST00000183841 122 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm27601-201ENSMUST00000184794 127 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm5058-201ENSMUST00000187331 463 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm28967-201ENSMUST00000187351 281 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC4.47□□□□□ -1.69
Sdc1P18828 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.47□□□□□ -1.69
Sdc1P18828 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm45042-201ENSMUST00000207377 211 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm31166-201ENSMUST00000209326 288 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm45626-201ENSMUST00000210093 361 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC4.47□□□□□ -1.69
Sdc1P18828 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm6906-201ENSMUST00000218014 569 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 AC116502.1-201ENSMUST00000220989 291 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 AC158521.1-202ENSMUST00000224352 645 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 CT009539.1-201ENSMUST00000226465 220 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Sdc1P18828 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm14896-201ENSMUST00000121311 1351 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 AC130831.1-201ENSMUST00000224546 1474 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms