Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col1a1P11087 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Gm23879-201ENSMUST00000116874 126 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Gm7973-201ENSMUST00000122107 488 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Gm22870-201ENSMUST00000157501 112 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Gm44108-201ENSMUST00000203525 422 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.5□□□□□ -1.37
Col1a1P11087 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.5□□□□□ -1.37
Col1a1P11087 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.5□□□□□ -1.37
Col1a1P11087 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Snord15b-201ENSMUST00000083032 145 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col1a1P11087 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col1a1P11087 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col1a1P11087 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.5□□□□□ -1.37
Col1a1P11087 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col1a1P11087 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col1a1P11087 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col1a1P11087 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm11912-201ENSMUST00000117235 264 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Gm6382-201ENSMUST00000118873 942 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Gm23883-201ENSMUST00000122686 290 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Gm22725-201ENSMUST00000158092 110 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm26950-201ENSMUST00000182734 498 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm43436-201ENSMUST00000199308 147 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Gm44952-201ENSMUST00000204443 433 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm46369-201ENSMUST00000221577 401 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col1a1P11087 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.49□□□□□ -1.37
Col1a1P11087 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col1a1P11087 Robo2-210ENSMUST00000226478 8059 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col1a1P11087 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.49□□□□□ -1.37
Col1a1P11087 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col1a1P11087 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm23692-201ENSMUST00000101881 160 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Gm26376-201ENSMUST00000104784 110 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm23700-201ENSMUST00000158842 102 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.48□□□□□ -1.37
Col1a1P11087 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col1a1P11087 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col1a1P11087 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col1a1P11087 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.48□□□□□ -1.37
Col1a1P11087 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms