Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm2367-201ENSMUST00000192374 472 ntBASIC5.89□□□□□ -1.47
TnfP06804 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.89□□□□□ -1.47
TnfP06804 Gm42581-201ENSMUST00000201774 966 ntBASIC5.89□□□□□ -1.47
TnfP06804 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.89□□□□□ -1.47
TnfP06804 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.89□□□□□ -1.47
TnfP06804 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC5.89□□□□□ -1.47
TnfP06804 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.89□□□□□ -1.47
TnfP06804 Gm6474-201ENSMUST00000223250 699 ntBASIC5.89□□□□□ -1.47
TnfP06804 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.89□□□□□ -1.47
TnfP06804 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.89□□□□□ -1.47
TnfP06804 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.89□□□□□ -1.47
TnfP06804 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.89□□□□□ -1.47
TnfP06804 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TnfP06804 Mir449a-201ENSMUST00000083641 91 ntBASIC5.89□□□□□ -1.47
TnfP06804 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.89□□□□□ -1.47
TnfP06804 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.89□□□□□ -1.47
TnfP06804 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TnfP06804 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.89□□□□□ -1.47
TnfP06804 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TnfP06804 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.89□□□□□ -1.47
TnfP06804 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TnfP06804 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TnfP06804 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.89□□□□□ -1.47
TnfP06804 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.88□□□□□ -1.47
TnfP06804 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.88□□□□□ -1.47
TnfP06804 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.88□□□□□ -1.47
TnfP06804 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TnfP06804 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.88□□□□□ -1.47
TnfP06804 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.88□□□□□ -1.47
TnfP06804 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
TnfP06804 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.88□□□□□ -1.47
TnfP06804 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm11677-201ENSMUST00000121349 977 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm15428-201ENSMUST00000121352 333 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.88□□□□□ -1.47
TnfP06804 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.88□□□□□ -1.47
TnfP06804 Gm15812-201ENSMUST00000162331 748 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm21756-201ENSMUST00000178380 930 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm21405-201ENSMUST00000179024 930 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm2914-201ENSMUST00000186120 328 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm21191-201ENSMUST00000186484 930 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm29503-201ENSMUST00000191044 930 ntBASIC5.88□□□□□ -1.47
TnfP06804 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.88□□□□□ -1.47
TnfP06804 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.88□□□□□ -1.47
TnfP06804 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.88□□□□□ -1.47
TnfP06804 Mir188-201ENSMUST00000083464 68 ntBASIC5.88□□□□□ -1.47
TnfP06804 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TnfP06804 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TnfP06804 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.88□□□□□ -1.47
TnfP06804 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TnfP06804 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
TnfP06804 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TnfP06804 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TnfP06804 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
TnfP06804 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TnfP06804 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TnfP06804 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.87□□□□□ -1.47
TnfP06804 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.87□□□□□ -1.47
TnfP06804 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TnfP06804 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms