Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm38263-201ENSMUST00000195879 3059 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm13590-201ENSMUST00000120183 1588 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 AC117608.2-201ENSMUST00000224124 1363 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 AC154734.1-201ENSMUST00000219957 2141 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 AC158982.1-205ENSMUST00000227339 1876 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm15012-201ENSMUST00000119176 106 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm18752-201ENSMUST00000192876 608 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm4036-201ENSMUST00000220842 626 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 AC158954.1-201ENSMUST00000228272 1006 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 AC124408.1-201ENSMUST00000228938 707 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 n-R5s62-201ENSMUST00000082780 96 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm44668-201ENSMUST00000207911 3265 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm15425-201ENSMUST00000119013 2711 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm37086-201ENSMUST00000193082 3452 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm38381-201ENSMUST00000193594 2275 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm23014-201ENSMUST00000104144 130 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm14756-201ENSMUST00000116395 240 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Olfr151-202ENSMUST00000221099 929 ntBASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Herc1E9PZP8 Gm44441-201ENSMUST00000203642 2475 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm25726-201ENSMUST00000104529 129 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm24627-201ENSMUST00000122764 138 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm24103-201ENSMUST00000174930 77 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 AC144733.2-201ENSMUST00000222552 2292 ntBASIC3.04□□□□□ -1.92
Herc1E9PZP8 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Herc1E9PZP8 Gm5757-201ENSMUST00000117494 528 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms