Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm22592-201ENSMUST00000104242 131 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm15754-201ENSMUST00000119191 478 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm13245-201ENSMUST00000119646 260 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm16200-201ENSMUST00000120385 331 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm22160-201ENSMUST00000158405 328 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm16139-201ENSMUST00000160015 420 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm27754-201ENSMUST00000183340 126 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm28188-201ENSMUST00000190483 236 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm4374-201ENSMUST00000204929 424 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm18541-201ENSMUST00000215935 538 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm11360-201ENSMUST00000221898 262 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Upk3aQ9JKX8 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm9836-201ENSMUST00000117132 216 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm12267-201ENSMUST00000121609 761 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm25489-201ENSMUST00000158727 141 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm27030-201ENSMUST00000182551 464 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm7266-201ENSMUST00000187999 405 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm37581-201ENSMUST00000192371 988 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm43629-201ENSMUST00000201782 704 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 LOC665443-201ENSMUST00000212284 796 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm45733-201ENSMUST00000212988 437 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upk3aQ9JKX8 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.35□□□□□ -1.55
Upk3aQ9JKX8 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms