Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm12077-201ENSMUST00000117049 364 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm23553-201ENSMUST00000157817 295 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm24860-201ENSMUST00000158457 276 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm16107-201ENSMUST00000162523 862 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm22355-201ENSMUST00000175531 96 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm27543-201ENSMUST00000183562 177 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Mir6539-201ENSMUST00000183732 110 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm29489-201ENSMUST00000188934 324 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm28507-201ENSMUST00000189737 703 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm43744-201ENSMUST00000196387 688 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm7733-201ENSMUST00000199038 919 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm18587-201ENSMUST00000213736 841 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm5087-204ENSMUST00000225820 645 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 AV026068-231ENSMUST00000225862 482 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 AC137950.3-201ENSMUST00000228250 246 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm16415-201ENSMUST00000080097 489 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm23459-201ENSMUST00000083259 131 ntBASIC5.01□□□□□ -1.61
Scrt1Q99M85 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Scrt1Q99M85 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Scrt1Q99M85 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scrt1Q99M85 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm3608-201ENSMUST00000086725 2858 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Scrt1Q99M85 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm38362-201ENSMUST00000192999 2064 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 Gm12057-201ENSMUST00000117244 1427 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm7927-201ENSMUST00000118818 880 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm16060-201ENSMUST00000153140 478 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm8032-201ENSMUST00000171009 574 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Scrt1Q99M85 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5□□□□□ -1.61
Scrt1Q99M85 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5□□□□□ -1.61
Scrt1Q99M85 Gm5334-201ENSMUST00000187472 720 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms