Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43121-201ENSMUST00000199065 1305 ntBASIC7.18□□□□□ -1.26
Clp1Q99LI9 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Clp1Q99LI9 Gm44224-201ENSMUST00000204131 1463 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 CT009480.3-201ENSMUST00000224051 3032 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm22771-201ENSMUST00000104449 91 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm11256-201ENSMUST00000118109 829 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm12442-201ENSMUST00000118372 338 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm15452-201ENSMUST00000119877 240 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm12006-201ENSMUST00000120786 403 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm15300-201ENSMUST00000122324 279 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm24065-201ENSMUST00000157487 264 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm25374-201ENSMUST00000158158 101 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm6647-201ENSMUST00000170514 641 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm18191-201ENSMUST00000174624 824 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm6055-201ENSMUST00000180532 378 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm37054-201ENSMUST00000193481 543 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm43725-201ENSMUST00000200122 369 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm2314-201ENSMUST00000200391 586 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm43501-201ENSMUST00000202513 107 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 AC120540.1-201ENSMUST00000221879 324 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 CT030166.1-201ENSMUST00000222654 357 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Defa-ps18-201ENSMUST00000098889 371 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.17□□□□□ -1.26
Clp1Q99LI9 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Clp1Q99LI9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Malat1-201ENSMUST00000172812 6983 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm45819-201ENSMUST00000210940 1751 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Snora35-201ENSMUST00000104579 128 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm13579-201ENSMUST00000118519 517 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms