Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Ndc1Q8VCB1 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ndc1Q8VCB1 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ndc1Q8VCB1 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ndc1Q8VCB1 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ndc1Q8VCB1 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ndc1Q8VCB1 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm13400-201ENSMUST00000117436 380 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm12985-201ENSMUST00000118376 183 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm15659-201ENSMUST00000118881 341 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm8032-201ENSMUST00000171009 574 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm27225-201ENSMUST00000183833 557 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm43708-201ENSMUST00000198857 961 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm30708-201ENSMUST00000202183 312 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm8999-201ENSMUST00000204951 969 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm18805-201ENSMUST00000206872 655 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm45448-201ENSMUST00000211739 209 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 AC112274.2-201ENSMUST00000218436 170 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm18388-201ENSMUST00000222339 557 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 AC156790.3-201ENSMUST00000226200 254 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Mir3068-201ENSMUST00000083004 136 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.06□□□□□ -1.44
Ndc1Q8VCB1 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm23311-201ENSMUST00000104152 134 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm25346-201ENSMUST00000104509 128 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm12643-201ENSMUST00000116078 374 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm23987-201ENSMUST00000117039 129 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm15176-201ENSMUST00000117734 135 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm13640-201ENSMUST00000118445 264 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm14580-201ENSMUST00000119122 718 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm5383-201ENSMUST00000121177 617 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm12639-201ENSMUST00000121400 493 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm15696-201ENSMUST00000121730 445 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm12518-201ENSMUST00000122075 779 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Gm26162-201ENSMUST00000157793 132 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC6.05□□□□□ -1.44
Ndc1Q8VCB1 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms