Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Col8a1Q00780 AC120347.2-201ENSMUST00000222224 2015 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm22372-201ENSMUST00000104589 136 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm15073-201ENSMUST00000117432 634 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm13114-201ENSMUST00000117605 106 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm12242-201ENSMUST00000118824 738 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm14202-201ENSMUST00000120121 311 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm22024-201ENSMUST00000122733 287 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.65□□□□□ -1.5
Col8a1Q00780 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm23250-201ENSMUST00000157444 267 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm22080-201ENSMUST00000157591 106 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm22523-201ENSMUST00000158696 100 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm16139-201ENSMUST00000160015 420 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm29356-201ENSMUST00000186935 373 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm29519-201ENSMUST00000186994 398 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm19185-201ENSMUST00000196365 643 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm30155-201ENSMUST00000223458 339 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 AC152394.1-201ENSMUST00000227360 1086 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 AC158954.1-201ENSMUST00000228272 1006 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col8a1Q00780 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.65□□□□□ -1.5
Col8a1Q00780 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col8a1Q00780 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col8a1Q00780 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col8a1Q00780 Gm45084-201ENSMUST00000207096 1957 ntBASIC5.65□□□□□ -1.51
Col8a1Q00780 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col8a1Q00780 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.65□□□□□ -1.51
Col8a1Q00780 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.65□□□□□ -1.51
Col8a1Q00780 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.65□□□□□ -1.51
Col8a1Q00780 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Col8a1Q00780 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col8a1Q00780 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col8a1Q00780 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm43429-201ENSMUST00000197889 2251 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms