Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37474-201ENSMUST00000194812 1814 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 AC163731.1-201ENSMUST00000225696 3118 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Mir1188-201ENSMUST00000116756 120 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm6427-201ENSMUST00000118721 979 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm15490-201ENSMUST00000119894 387 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm13488-201ENSMUST00000120419 179 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm12732-201ENSMUST00000121688 180 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm3307-201ENSMUST00000176164 632 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm6543-201ENSMUST00000197353 808 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm43712-201ENSMUST00000198020 291 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm9332-201ENSMUST00000198431 730 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm19174-201ENSMUST00000216944 956 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Mir412-201ENSMUST00000083636 80 ntBASIC4.91□□□□□ -1.62
Nkx3-1P97436 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Nkx3-1P97436 Gm45424-201ENSMUST00000210575 3300 ntBASIC4.9□□□□□ -1.62
Nkx3-1P97436 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Nkx3-1P97436 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Nkx3-1P97436 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Nkx3-1P97436 Gm43874-201ENSMUST00000204853 2798 ntBASIC4.9□□□□□ -1.62
Nkx3-1P97436 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Nkx3-1P97436 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Nkx3-1P97436 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Nkx3-1P97436 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm13681-201ENSMUST00000117925 210 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm14871-201ENSMUST00000119056 194 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm22650-201ENSMUST00000175138 105 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm42437-201ENSMUST00000197263 923 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm31306-201ENSMUST00000197517 508 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm42776-201ENSMUST00000198031 406 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Mir6994-201ENSMUST00000198985 73 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm45008-201ENSMUST00000206420 493 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm5418-201ENSMUST00000206932 528 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.9□□□□□ -1.63
Nkx3-1P97436 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms