Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.87□□□□□ -1.31
Sox1P53783 Gm24454-201ENSMUST00000083349 132 ntBASIC6.87□□□□□ -1.31
Sox1P53783 Mir188-201ENSMUST00000083464 68 ntBASIC6.87□□□□□ -1.31
Sox1P53783 Gm25004-201ENSMUST00000083811 161 ntBASIC6.87□□□□□ -1.31
Sox1P53783 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.87□□□□□ -1.31
Sox1P53783 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox1P53783 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
Sox1P53783 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox1P53783 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox1P53783 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.87□□□□□ -1.31
Sox1P53783 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox1P53783 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox1P53783 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox1P53783 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox1P53783 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox1P53783 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Gm22072-201ENSMUST00000116850 121 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm22091-201ENSMUST00000116908 127 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm11876-201ENSMUST00000120002 269 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm16428-201ENSMUST00000121193 723 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm15388-201ENSMUST00000121578 726 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Gm14349-201ENSMUST00000137155 902 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox1P53783 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox1P53783 Gm25898-201ENSMUST00000158303 106 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox1P53783 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox1P53783 Gm26729-201ENSMUST00000180744 352 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm44361-201ENSMUST00000197960 94 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox1P53783 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Gm45874-201ENSMUST00000212423 346 ntBASIC6.86□□□□□ -1.31
Sox1P53783 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.86□□□□□ -1.31
Sox1P53783 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox1P53783 Gm7802-201ENSMUST00000216464 262 ntBASIC6.86□□□□□ -1.31
Sox1P53783 AC158392.2-201ENSMUST00000225402 969 ntBASIC6.86□□□□□ -1.31
Sox1P53783 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.86□□□□□ -1.31
Sox1P53783 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox1P53783 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox1P53783 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Sox1P53783 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox1P53783 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox1P53783 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox1P53783 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Sox1P53783 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.86□□□□□ -1.31
Sox1P53783 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.85□□□□□ -1.31
Sox1P53783 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox1P53783 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox1P53783 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Sox1P53783 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Gm23692-201ENSMUST00000101881 160 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm26422-201ENSMUST00000104276 132 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm24888-201ENSMUST00000104387 130 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Sox1P53783 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.85□□□□□ -1.31
Sox1P53783 Gm16082-201ENSMUST00000115992 377 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm13013-201ENSMUST00000119087 523 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm13555-201ENSMUST00000121668 319 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm7309-201ENSMUST00000121670 581 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm11965-201ENSMUST00000122017 277 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Sox1P53783 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox1P53783 Mir1932-201ENSMUST00000157390 90 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm22724-201ENSMUST00000158091 127 ntBASIC6.85□□□□□ -1.31
Sox1P53783 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox1P53783 Gm6808-201ENSMUST00000162341 807 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms