Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Chd1P40201 Snord66-201ENSMUST00000104051 75 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Chd1P40201 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Gm12520-201ENSMUST00000117493 316 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Gm13000-201ENSMUST00000120937 496 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC8.29□□□□□ -1.08
Chd1P40201 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC8.29□□□□□ -1.08
Chd1P40201 Gm42798-201ENSMUST00000200853 3972 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.29□□□□□ -1.08
Chd1P40201 CT025689.2-201ENSMUST00000224979 429 ntBASIC8.29□□□□□ -1.08
Chd1P40201 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Chd1P40201 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Chd1P40201 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Olfr878-201ENSMUST00000086061 1065 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Chd1P40201 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Gm11878-201ENSMUST00000117908 400 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Gm25103-201ENSMUST00000122671 318 ntBASIC8.29□□□□□ -1.08
Chd1P40201 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC8.29□□□□□ -1.08
Chd1P40201 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC8.29□□□□□ -1.08
Chd1P40201 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC8.29□□□□□ -1.08
Chd1P40201 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Mir6391-201ENSMUST00000184391 104 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Gm44603-201ENSMUST00000206820 367 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Gm19096-201ENSMUST00000209705 766 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Gm9685-201ENSMUST00000211275 538 ntBASIC8.29□□□□□ -1.08
Chd1P40201 AC113269.1-201ENSMUST00000227185 674 ntBASIC8.29□□□□□ -1.08
Chd1P40201 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Gm6104-201ENSMUST00000078030 603 ntBASIC8.29□□□□□ -1.08
Chd1P40201 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Chd1P40201 Gm18422-202ENSMUST00000203798 2214 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chd1P40201 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC8.28□□□□□ -1.08
Chd1P40201 AC151734.1-201ENSMUST00000227023 1740 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chd1P40201 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chd1P40201 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Chd1P40201 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Chd1P40201 Gm23608-201ENSMUST00000104545 128 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Gm11227-201ENSMUST00000119774 471 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Gm24444-201ENSMUST00000157244 308 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Gm17951-201ENSMUST00000198536 496 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Gm45910-201ENSMUST00000212493 1003 ntBASIC8.28□□□□□ -1.08
Chd1P40201 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chd1P40201 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Chd1P40201 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Chd1P40201 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Chd1P40201 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.28□□□□□ -1.08
Chd1P40201 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Chd1P40201 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Chd1P40201 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Chd1P40201 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Chd1P40201 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC8.27□□□□□ -1.09
Chd1P40201 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Chd1P40201 Gm22468-201ENSMUST00000116680 120 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm26248-201ENSMUST00000116700 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm26137-201ENSMUST00000116701 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm26190-201ENSMUST00000116704 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24617-201ENSMUST00000116705 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm25778-201ENSMUST00000116713 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm25774-201ENSMUST00000116717 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm22102-201ENSMUST00000116730 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm23177-201ENSMUST00000116784 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24193-201ENSMUST00000116801 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24744-201ENSMUST00000116833 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24427-201ENSMUST00000116896 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm22346-201ENSMUST00000116918 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm23606-201ENSMUST00000116938 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm22029-201ENSMUST00000116940 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm26298-201ENSMUST00000116956 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm23844-201ENSMUST00000116959 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24484-201ENSMUST00000117009 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm25347-201ENSMUST00000117026 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm22112-201ENSMUST00000117032 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm7657-201ENSMUST00000118851 666 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm22991-201ENSMUST00000178126 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm25754-201ENSMUST00000178653 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm22419-201ENSMUST00000178780 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24802-201ENSMUST00000178897 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm25208-201ENSMUST00000178964 121 ntBASIC8.27□□□□□ -1.09
Chd1P40201 Gm24567-201ENSMUST00000179294 121 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms