Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Usp4P35123 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm4234-201ENSMUST00000119747 714 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm14614-201ENSMUST00000119873 384 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm7700-201ENSMUST00000120273 970 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm13118-201ENSMUST00000120402 549 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm22143-201ENSMUST00000157401 203 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm23674-201ENSMUST00000157473 131 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm22186-201ENSMUST00000157822 122 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm23385-201ENSMUST00000158592 295 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm6245-201ENSMUST00000164699 768 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm2930-201ENSMUST00000170403 474 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm2229-201ENSMUST00000193328 710 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm6074-201ENSMUST00000193340 451 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm38237-201ENSMUST00000193366 376 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm32158-201ENSMUST00000200135 404 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm18586-201ENSMUST00000217265 518 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm8137-201ENSMUST00000218997 463 ntBASIC6.51□□□□□ -1.37
Usp4P35123 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Cma2-202ENSMUST00000228263 857 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Usp4P35123 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.51□□□□□ -1.37
Usp4P35123 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
Usp4P35123 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Usp4P35123 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Usp4P35123 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Usp4P35123 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Usp4P35123 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.5□□□□□ -1.37
Usp4P35123 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm24790-201ENSMUST00000104285 132 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm5793-201ENSMUST00000119393 630 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm8648-201ENSMUST00000122457 221 ntBASIC6.5□□□□□ -1.37
Usp4P35123 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.5□□□□□ -1.37
Usp4P35123 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm15534-201ENSMUST00000137642 562 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm22895-201ENSMUST00000157508 308 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm25904-201ENSMUST00000158491 143 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm21756-201ENSMUST00000178380 930 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm21405-201ENSMUST00000179024 930 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm28637-201ENSMUST00000179424 345 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm27193-201ENSMUST00000184217 586 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm21191-201ENSMUST00000186484 930 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm28113-201ENSMUST00000188280 229 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm21489-201ENSMUST00000189668 818 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms