Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.71□□□□□ -1.66
Cdx1P18111 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx1P18111 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm19125-201ENSMUST00000188408 1383 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cdx1P18111 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm22370-201ENSMUST00000102422 83 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm12131-201ENSMUST00000117479 359 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm13702-201ENSMUST00000118542 825 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm11447-201ENSMUST00000118983 858 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm12565-201ENSMUST00000119004 649 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Cdx1P18111 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdx1P18111 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm22857-201ENSMUST00000174969 134 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm6057-201ENSMUST00000195927 314 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm8861-201ENSMUST00000196346 832 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm29736-201ENSMUST00000198189 385 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm45750-201ENSMUST00000211966 354 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Gm9535-201ENSMUST00000218499 768 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 AC156576.2-202ENSMUST00000222525 411 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdx1P18111 AC105950.1-201ENSMUST00000222637 408 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 CT009515.3-201ENSMUST00000226509 671 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 AC139197.1-201ENSMUST00000228332 813 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cdx1P18111 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Cdx1P18111 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Cdx1P18111 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.7□□□□□ -1.66
Cdx1P18111 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Cdx1P18111 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Cdx1P18111 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx1P18111 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Snord65-201ENSMUST00000104269 72 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Snora35-201ENSMUST00000104579 128 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Mir292-201ENSMUST00000104847 82 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm11866-201ENSMUST00000120209 335 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm6446-201ENSMUST00000120604 818 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm14054-201ENSMUST00000120744 704 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm13162-201ENSMUST00000121481 454 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm22820-201ENSMUST00000157205 329 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms