Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.75□□□□□ -1.49
Lire1P11260 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.75□□□□□ -1.49
Lire1P11260 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lire1P11260 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm24695-201ENSMUST00000083877 83 ntBASIC5.75□□□□□ -1.49
Lire1P11260 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lire1P11260 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lire1P11260 Gm25346-201ENSMUST00000104509 128 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm14712-201ENSMUST00000120195 772 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm15022-201ENSMUST00000122074 746 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm15300-201ENSMUST00000122324 279 ntBASIC5.74□□□□□ -1.49
Lire1P11260 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.74□□□□□ -1.49
Lire1P11260 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.74□□□□□ -1.49
Lire1P11260 Gm23225-201ENSMUST00000158121 114 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm24860-201ENSMUST00000158457 276 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm17366-201ENSMUST00000167629 187 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lire1P11260 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Mir7685-201ENSMUST00000183555 62 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm24949-201ENSMUST00000183609 215 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Mir6348-201ENSMUST00000183804 120 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Gm18348-201ENSMUST00000191227 820 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Gm43015-201ENSMUST00000199087 565 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.74□□□□□ -1.49
Lire1P11260 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.74□□□□□ -1.49
Lire1P11260 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.74□□□□□ -1.49
Lire1P11260 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lire1P11260 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.74□□□□□ -1.49
Lire1P11260 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lire1P11260 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.74□□□□□ -1.49
Lire1P11260 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Lire1P11260 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Lire1P11260 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Lire1P11260 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Lire1P11260 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.73□□□□□ -1.49
Lire1P11260 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lire1P11260 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm24434-201ENSMUST00000104081 132 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm6446-201ENSMUST00000120604 818 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Lire1P11260 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm19791-201ENSMUST00000180398 859 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Gm27460-201ENSMUST00000184213 100 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm8009-201ENSMUST00000191672 436 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm38097-201ENSMUST00000192936 439 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms