Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm42646-201ENSMUST00000202233 914 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm29759-201ENSMUST00000205860 327 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm9604-201ENSMUST00000211175 433 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm7240-201ENSMUST00000220769 664 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm35558-202ENSMUST00000221819 499 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC133598.2-201ENSMUST00000224302 624 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC125019.1-201ENSMUST00000224809 908 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm21731-201ENSMUST00000079524 489 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm26072-201ENSMUST00000083135 107 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm25004-201ENSMUST00000083811 161 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm24519-201ENSMUST00000104507 132 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm11903-201ENSMUST00000118958 727 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm14070-201ENSMUST00000120773 428 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm24517-201ENSMUST00000122560 107 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm22025-201ENSMUST00000122734 302 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm6081-201ENSMUST00000134472 489 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm25979-201ENSMUST00000157177 138 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm22820-201ENSMUST00000157205 329 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm17154-201ENSMUST00000165748 431 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm25598-201ENSMUST00000179031 107 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm26587-201ENSMUST00000180795 989 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm27014-201ENSMUST00000182658 937 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Mir6241-201ENSMUST00000184225 103 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm29545-201ENSMUST00000188878 694 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm20832-201ENSMUST00000189076 665 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm30638-201ENSMUST00000195570 656 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm36728-201ENSMUST00000195782 665 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm2975-201ENSMUST00000209710 820 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm45689-201ENSMUST00000210522 133 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm4052-201ENSMUST00000220890 451 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm9293-201ENSMUST00000223096 306 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 AC151730.2-201ENSMUST00000224027 475 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms