Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Gm36939-201ENSMUST00000194889 439 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Gm32526-201ENSMUST00000221878 981 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upk3aQ9JKX8 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm24265-201ENSMUST00000101833 141 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm14472-201ENSMUST00000119815 282 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm11369-201ENSMUST00000120812 318 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm15275-201ENSMUST00000154752 347 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm3076-201ENSMUST00000161613 451 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm6808-201ENSMUST00000162341 807 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm3216-201ENSMUST00000166927 486 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm3141-201ENSMUST00000168726 499 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm25025-201ENSMUST00000175018 111 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm22122-201ENSMUST00000175147 200 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm24407-201ENSMUST00000177864 141 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm1972-201ENSMUST00000181606 964 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm3605-201ENSMUST00000185858 440 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm28507-201ENSMUST00000189737 703 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm43390-201ENSMUST00000196614 421 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm43655-201ENSMUST00000197367 222 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm9057-201ENSMUST00000198791 296 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm44487-201ENSMUST00000205145 325 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm44539-201ENSMUST00000206010 238 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm4032-201ENSMUST00000210886 487 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm45249-201ENSMUST00000211021 348 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm6477-201ENSMUST00000217098 764 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm19195-201ENSMUST00000222018 511 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm10705-201ENSMUST00000098980 461 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Upk3aQ9JKX8 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms