Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Gm21286-201ENSMUST00000098035 545 ntBASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Trim39Q9ESN2 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm22439-201ENSMUST00000104048 132 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm23484-201ENSMUST00000104178 131 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm25276-201ENSMUST00000104300 124 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm6490-201ENSMUST00000111862 461 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm16400-201ENSMUST00000116523 1029 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm5752-201ENSMUST00000117771 594 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm15665-201ENSMUST00000119116 847 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm14580-201ENSMUST00000119122 718 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm13163-201ENSMUST00000119875 336 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm11796-201ENSMUST00000120208 972 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm7700-201ENSMUST00000120273 970 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm12297-201ENSMUST00000121380 979 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm11759-201ENSMUST00000121742 464 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm23079-201ENSMUST00000157847 117 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm18833-201ENSMUST00000173218 862 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm20453-201ENSMUST00000173968 226 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm17973-201ENSMUST00000174509 520 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm26335-201ENSMUST00000178449 107 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm7870-201ENSMUST00000184467 616 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm29389-201ENSMUST00000191562 352 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm37837-201ENSMUST00000191743 604 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm7285-201ENSMUST00000198801 580 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm44465-201ENSMUST00000199536 114 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm44192-201ENSMUST00000204195 556 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm18484-201ENSMUST00000204389 991 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm45446-201ENSMUST00000209348 216 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm2975-201ENSMUST00000209710 820 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm17199-201ENSMUST00000097296 416 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.62□□□□□ -1.35
Trim39Q9ESN2 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Trim39Q9ESN2 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim39Q9ESN2 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.61□□□□□ -1.35
Trim39Q9ESN2 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Trim39Q9ESN2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim39Q9ESN2 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms