Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm11826-201ENSMUST00000118781 438 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm12850-201ENSMUST00000119210 436 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm12808-201ENSMUST00000120597 404 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Scarna6-201ENSMUST00000158656 265 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Mir3110-201ENSMUST00000175053 80 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm23631-201ENSMUST00000175291 123 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm43444-201ENSMUST00000198123 291 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.6□□□□□ -1.51
OtofQ9ESF1 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
OtofQ9ESF1 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm14874-201ENSMUST00000118995 438 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm11679-201ENSMUST00000121830 779 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm11507-201ENSMUST00000156462 412 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Scarna13-201ENSMUST00000158164 275 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Mir3090-201ENSMUST00000175597 87 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Gm5321-201ENSMUST00000072050 447 ntBASIC5.59□□□□□ -1.51
OtofQ9ESF1 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
OtofQ9ESF1 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
OtofQ9ESF1 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
OtofQ9ESF1 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
OtofQ9ESF1 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
OtofQ9ESF1 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
OtofQ9ESF1 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm11617-201ENSMUST00000119609 639 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm22916-201ENSMUST00000157616 119 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm3170-201ENSMUST00000168753 850 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm3348-201ENSMUST00000177813 850 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm8604-201ENSMUST00000183150 965 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Mir6343-201ENSMUST00000183584 84 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Mir6903-201ENSMUST00000183597 88 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm17775-201ENSMUST00000198542 258 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
OtofQ9ESF1 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms