Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Lsm1Q8VC85 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AW046200-203ENSMUST00000211787 2479 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm11774-201ENSMUST00000118601 293 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm6427-201ENSMUST00000118721 979 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm15618-201ENSMUST00000121610 452 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm22492-201ENSMUST00000157192 297 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm24692-201ENSMUST00000157761 146 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm23149-201ENSMUST00000158837 230 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm6872-201ENSMUST00000165001 700 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm3650-201ENSMUST00000180600 747 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm7745-201ENSMUST00000182235 973 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm28885-201ENSMUST00000185615 563 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm21803-201ENSMUST00000188897 693 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm28567-201ENSMUST00000190270 693 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm37044-201ENSMUST00000193531 693 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm38369-201ENSMUST00000195101 693 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm44432-201ENSMUST00000203342 938 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm44312-201ENSMUST00000203536 469 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm44768-201ENSMUST00000205719 393 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm6068-201ENSMUST00000222270 387 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm18247-201ENSMUST00000222937 601 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm25133-201ENSMUST00000082647 130 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Snora30-201ENSMUST00000083325 130 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lsm1Q8VC85 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm14485-201ENSMUST00000119489 493 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm7079-201ENSMUST00000119726 171 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm7309-201ENSMUST00000121670 581 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm8185-201ENSMUST00000160999 669 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm4032-201ENSMUST00000210886 487 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm18996-201ENSMUST00000214851 755 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm8137-201ENSMUST00000218997 463 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
Lsm1Q8VC85 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.4□□□□□ -1.54
Lsm1Q8VC85 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms