Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.54□□□□□ -1.52
Ccdc28bQ8CEG5 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm13702-201ENSMUST00000118542 825 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14769-201ENSMUST00000118590 432 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm11445-201ENSMUST00000119101 532 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm13924-201ENSMUST00000119899 486 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm22916-201ENSMUST00000157616 119 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm8993-201ENSMUST00000182182 983 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm37336-202ENSMUST00000193705 468 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm31306-201ENSMUST00000197517 508 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm7492-201ENSMUST00000201745 725 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm18226-201ENSMUST00000215261 521 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 CT009515.1-201ENSMUST00000228127 586 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc28bQ8CEG5 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm11256-201ENSMUST00000118109 829 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm11742-201ENSMUST00000119903 233 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm7746-201ENSMUST00000120966 503 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm15877-201ENSMUST00000121897 964 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26170-201ENSMUST00000158419 148 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm42663-201ENSMUST00000199883 351 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm5990-201ENSMUST00000203126 746 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6261-201ENSMUST00000204707 760 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms