Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.71□□□□□ -1.17
Trim47Q8C0E3 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm22256-201ENSMUST00000102291 107 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm2178-201ENSMUST00000104927 357 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm11869-201ENSMUST00000118701 329 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm14352-201ENSMUST00000119250 449 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm12880-201ENSMUST00000120652 494 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm13237-201ENSMUST00000122151 635 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm25395-201ENSMUST00000157343 272 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm23352-201ENSMUST00000158428 64 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm25660-201ENSMUST00000158470 104 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm6245-201ENSMUST00000164699 768 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm17044-201ENSMUST00000168549 828 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Mir7033-201ENSMUST00000184259 81 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm29556-201ENSMUST00000187591 696 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm28151-201ENSMUST00000189404 951 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm45312-201ENSMUST00000210566 311 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm8667-201ENSMUST00000211112 449 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm4042-201ENSMUST00000216946 637 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm9267-201ENSMUST00000222831 404 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 AC158511.1-201ENSMUST00000223622 764 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Zfp429-203ENSMUST00000224684 524 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm13340-201ENSMUST00000117219 1545 ntBASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trim47Q8C0E3 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm11821-201ENSMUST00000117335 979 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm15310-201ENSMUST00000117891 372 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm3216-201ENSMUST00000166927 486 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Mir199b-201ENSMUST00000175066 110 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm7094-201ENSMUST00000178379 366 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm25617-201ENSMUST00000179548 133 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm28016-201ENSMUST00000184594 196 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm29470-201ENSMUST00000188007 696 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm36935-201ENSMUST00000192526 292 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm37523-201ENSMUST00000194901 412 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm25617-202ENSMUST00000198387 132 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm43054-201ENSMUST00000199495 884 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm43849-201ENSMUST00000201086 215 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm45192-201ENSMUST00000206749 283 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim47Q8C0E3 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.7□□□□□ -1.18
Trim47Q8C0E3 AC152946.2-201ENSMUST00000219071 337 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms