Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.66□□□□□ -1.5
ClpbQ60649 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.66□□□□□ -1.5
ClpbQ60649 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.65□□□□□ -1.5
ClpbQ60649 Mir546-201ENSMUST00000102105 121 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ClpbQ60649 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.65□□□□□ -1.5
ClpbQ60649 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm13428-201ENSMUST00000117540 365 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm14115-201ENSMUST00000119242 482 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm14805-201ENSMUST00000120172 340 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm13493-201ENSMUST00000120318 493 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm11852-201ENSMUST00000120806 222 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm11990-201ENSMUST00000121505 897 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm14237-201ENSMUST00000122080 430 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm16359-201ENSMUST00000124511 289 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm26211-201ENSMUST00000158578 129 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ClpbQ60649 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm20480-201ENSMUST00000173953 250 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm27044-201ENSMUST00000183033 796 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm27315-201ENSMUST00000183977 154 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm28973-201ENSMUST00000189310 613 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm37884-201ENSMUST00000191857 818 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm22897-202ENSMUST00000197782 127 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm43478-201ENSMUST00000200381 292 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm18645-202ENSMUST00000212222 760 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm21089-201ENSMUST00000215843 325 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm4928-201ENSMUST00000219622 850 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ClpbQ60649 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 CT025525.1-201ENSMUST00000226325 1054 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.65□□□□□ -1.5
ClpbQ60649 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ClpbQ60649 Gm4822-201ENSMUST00000077551 479 ntBASIC5.65□□□□□ -1.5
ClpbQ60649 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ClpbQ60649 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ClpbQ60649 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.65□□□□□ -1.51
ClpbQ60649 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ClpbQ60649 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.65□□□□□ -1.51
ClpbQ60649 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.65□□□□□ -1.51
ClpbQ60649 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.65□□□□□ -1.51
ClpbQ60649 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ClpbQ60649 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ClpbQ60649 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
ClpbQ60649 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ClpbQ60649 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.64□□□□□ -1.51
ClpbQ60649 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.64□□□□□ -1.51
ClpbQ60649 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ClpbQ60649 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ClpbQ60649 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm15018-201ENSMUST00000117090 633 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm12193-201ENSMUST00000117250 379 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm8501-201ENSMUST00000117684 432 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm14529-201ENSMUST00000117894 406 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm13593-201ENSMUST00000121329 692 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
ClpbQ60649 Gm14970-201ENSMUST00000122289 355 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ClpbQ60649 Mir1945-201ENSMUST00000157919 78 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm24767-201ENSMUST00000158509 95 ntBASIC5.64□□□□□ -1.51
ClpbQ60649 Gm16164-201ENSMUST00000160078 468 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms