Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Col8a1Q00780 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.67□□□□□ -1.5
Col8a1Q00780 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 CT030238.4-201ENSMUST00000228579 801 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Mir484-201ENSMUST00000093566 67 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Col8a1Q00780 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col8a1Q00780 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.67□□□□□ -1.5
Col8a1Q00780 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col8a1Q00780 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.67□□□□□ -1.5
Col8a1Q00780 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm11976-201ENSMUST00000119236 295 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm12433-201ENSMUST00000119659 255 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm13815-201ENSMUST00000119963 412 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.66□□□□□ -1.5
Col8a1Q00780 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm21909-201ENSMUST00000178260 439 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm9167-201ENSMUST00000182469 962 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.66□□□□□ -1.5
Col8a1Q00780 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm5886-202ENSMUST00000203957 522 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm45750-201ENSMUST00000211966 354 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm18103-201ENSMUST00000216621 779 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm18338-201ENSMUST00000222381 560 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm46379-201ENSMUST00000222551 265 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 AL591207.2-201ENSMUST00000222991 337 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 AC138765.3-201ENSMUST00000227981 423 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col8a1Q00780 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC5.66□□□□□ -1.5
Col8a1Q00780 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms