Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm5125-201ENSMUST00000148614 624 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm16112-201ENSMUST00000159075 382 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm21839-201ENSMUST00000179536 378 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Gm27348-201ENSMUST00000184511 170 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.11□□□□□ -1.43
Tpm1P58771 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm37444-201ENSMUST00000193605 439 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm42708-201ENSMUST00000196332 905 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.11□□□□□ -1.43
Tpm1P58771 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm7887-201ENSMUST00000056948 537 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm43024-201ENSMUST00000196770 4352 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Tpm1P58771 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Tpm1P58771 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Tpm1P58771 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Tpm1P58771 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Tpm1P58771 Gm37628-201ENSMUST00000194644 5440 ntBASIC6.11□□□□□ -1.43
Tpm1P58771 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tpm1P58771 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Tpm1P58771 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Tpm1P58771 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm7146-201ENSMUST00000116079 739 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm7571-201ENSMUST00000120252 927 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm16330-201ENSMUST00000128324 297 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm22492-201ENSMUST00000157192 297 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm24692-201ENSMUST00000157761 146 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm23207-201ENSMUST00000158665 102 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm25065-201ENSMUST00000177914 132 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm25891-201ENSMUST00000180050 132 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm27148-201ENSMUST00000185086 160 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm28883-201ENSMUST00000189256 369 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm37030-201ENSMUST00000194254 295 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm37659-201ENSMUST00000194574 111 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm43233-201ENSMUST00000200491 616 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm33178-201ENSMUST00000212090 257 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.1□□□□□ -1.43
Tpm1P58771 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm6068-201ENSMUST00000222270 387 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Gm8256-203ENSMUST00000228692 591 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Tpm1P58771 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.1□□□□□ -1.43
Tpm1P58771 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Tpm1P58771 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Tpm1P58771 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Tpm1P58771 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.1□□□□□ -1.43
Tpm1P58771 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tpm1P58771 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Tpm1P58771 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Tpm1P58771 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Tpm1P58771 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Tpm1P58771 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Tpm1P58771 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Tpm1P58771 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Tpm1P58771 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Tpm1P58771 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Tpm1P58771 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC6.09□□□□□ -1.43
Tpm1P58771 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Tpm1P58771 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.09□□□□□ -1.43
Tpm1P58771 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Tpm1P58771 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Tpm1P58771 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Tpm1P58771 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Tpm1P58771 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Tpm1P58771 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms