Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Sox3P53784 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm14871-201ENSMUST00000119056 194 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm13818-201ENSMUST00000119441 511 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm12399-201ENSMUST00000121475 446 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm15335-201ENSMUST00000122442 411 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Mir1945-201ENSMUST00000157919 78 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.47□□□□□ -1.53
Sox3P53784 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm27679-201ENSMUST00000184612 84 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox3P53784 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm29489-201ENSMUST00000188934 324 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.47□□□□□ -1.53
Sox3P53784 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm45249-201ENSMUST00000211021 348 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.47□□□□□ -1.53
Sox3P53784 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.47□□□□□ -1.53
Sox3P53784 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.46□□□□□ -1.53
Sox3P53784 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.46□□□□□ -1.53
Sox3P53784 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox3P53784 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.46□□□□□ -1.53
Sox3P53784 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.53
Sox3P53784 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Sox3P53784 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Sox3P53784 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox3P53784 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sox3P53784 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Sox3P53784 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm9429-201ENSMUST00000117804 868 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm14352-201ENSMUST00000119250 449 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm15275-201ENSMUST00000154752 347 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm8358-201ENSMUST00000167222 555 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm9499-201ENSMUST00000180888 964 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sox3P53784 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm8669-201ENSMUST00000183839 945 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm20203-201ENSMUST00000192352 332 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm5306-201ENSMUST00000203325 757 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm44432-201ENSMUST00000203342 938 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm45596-201ENSMUST00000209279 434 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.46□□□□□ -1.54
Sox3P53784 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 AC159246.1-201ENSMUST00000214478 249 ntBASIC5.46□□□□□ -1.54
Sox3P53784 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.46□□□□□ -1.54
Sox3P53784 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.46□□□□□ -1.54
Sox3P53784 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms