Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Col18a1P39061 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col18a1P39061 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.72□□□□□ -1.17
Col18a1P39061 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col18a1P39061 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm37482-201ENSMUST00000194899 2791 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm23879-201ENSMUST00000116874 126 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm11561-201ENSMUST00000117429 417 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm6620-201ENSMUST00000120113 715 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm24551-201ENSMUST00000158645 92 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm6223-201ENSMUST00000178436 871 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm37088-201ENSMUST00000193887 406 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm9038-201ENSMUST00000203400 604 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm44776-201ENSMUST00000207212 381 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm45458-201ENSMUST00000209900 522 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm45405-201ENSMUST00000211544 609 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Gm46191-201ENSMUST00000218899 433 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col18a1P39061 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Col18a1P39061 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col18a1P39061 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Col18a1P39061 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col18a1P39061 Gm4822-201ENSMUST00000077551 479 ntBASIC7.71□□□□□ -1.17
Col18a1P39061 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Col18a1P39061 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Col18a1P39061 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Col18a1P39061 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col18a1P39061 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm14769-201ENSMUST00000118590 432 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC7.71□□□□□ -1.18
Col18a1P39061 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm2691-201ENSMUST00000203205 901 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm2099-201ENSMUST00000220979 412 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 Ap3m1-208ENSMUST00000224016 764 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Col18a1P39061 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col18a1P39061 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.71□□□□□ -1.18
Col18a1P39061 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Col18a1P39061 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col18a1P39061 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm15803-201ENSMUST00000120118 394 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm13460-201ENSMUST00000121274 353 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Mir1947-201ENSMUST00000158235 85 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm16588-201ENSMUST00000162889 355 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm17711-201ENSMUST00000172028 237 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm26968-201ENSMUST00000182894 481 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm18924-201ENSMUST00000211929 316 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm17820-201ENSMUST00000220213 1068 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 AC144733.1-201ENSMUST00000222893 1289 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm22826-201ENSMUST00000083774 165 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms