Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Col2a1P28481 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.35□□□□□ -1.39
Col2a1P28481 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col2a1P28481 Gm24429-201ENSMUST00000104076 132 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gm11975-201ENSMUST00000118772 481 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col2a1P28481 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.34□□□□□ -1.39
Col2a1P28481 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Gm24860-201ENSMUST00000158457 276 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.34□□□□□ -1.39
Col2a1P28481 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Gm2914-201ENSMUST00000186120 328 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Trbv9-201ENSMUST00000194494 290 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gm18850-201ENSMUST00000211578 388 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Gm18329-201ENSMUST00000215832 589 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.34□□□□□ -1.39
Col2a1P28481 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Zfp429-203ENSMUST00000224684 524 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col2a1P28481 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col2a1P28481 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col2a1P28481 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.34□□□□□ -1.39
Col2a1P28481 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col2a1P28481 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
Col2a1P28481 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Gm12317-201ENSMUST00000122307 319 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Mir6994-201ENSMUST00000198985 73 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm18215-201ENSMUST00000204429 798 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Gm21041-201ENSMUST00000214829 823 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm18904-201ENSMUST00000218756 329 ntBASIC6.34□□□□□ -1.4
Col2a1P28481 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.34□□□□□ -1.4
Col2a1P28481 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col2a1P28481 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Col2a1P28481 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col2a1P28481 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Col2a1P28481 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Malat1-201ENSMUST00000172812 6983 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 Gm12808-201ENSMUST00000120597 404 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Col2a1P28481 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Gm19029-201ENSMUST00000189923 564 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Gm2011-203ENSMUST00000203750 435 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 Gm20368-201ENSMUST00000220716 301 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.33□□□□□ -1.4
Col2a1P28481 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col2a1P28481 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col2a1P28481 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col2a1P28481 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms