Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm32899-201ENSMUST00000219694 207 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 CT030166.1-201ENSMUST00000222654 357 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm25403-201ENSMUST00000082971 143 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Mir455-201ENSMUST00000093594 82 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm44289-201ENSMUST00000204144 1390 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm23942-201ENSMUST00000101956 107 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm23748-201ENSMUST00000104227 131 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm13900-201ENSMUST00000119402 498 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm12873-201ENSMUST00000119988 422 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm11263-201ENSMUST00000121853 749 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm13471-201ENSMUST00000122057 433 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm22276-201ENSMUST00000122469 129 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm21758-201ENSMUST00000179336 819 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm26959-201ENSMUST00000182376 978 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm27026-201ENSMUST00000183003 892 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm27152-201ENSMUST00000183828 99 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm18406-201ENSMUST00000185872 669 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm28597-201ENSMUST00000187664 666 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm29639-201ENSMUST00000188375 580 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm18875-201ENSMUST00000188563 882 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm29647-201ENSMUST00000188795 666 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm28337-201ENSMUST00000190425 666 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm28504-201ENSMUST00000190977 666 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm7412-201ENSMUST00000191692 605 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm31511-201ENSMUST00000193134 657 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm35843-201ENSMUST00000193716 666 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm8454-201ENSMUST00000196980 811 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm43141-201ENSMUST00000199695 274 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.88□□□□□ -1.47
Pcdh1F7BJK1 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms