Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm44580-201ENSMUST00000206333 877 ntBASIC5.56□□□□□ -1.52
H2afb2S4R1M3 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.56□□□□□ -1.52
H2afb2S4R1M3 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
H2afb2S4R1M3 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm6754-201ENSMUST00000117124 913 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm11821-201ENSMUST00000117335 979 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm13679-201ENSMUST00000118678 484 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm4989-201ENSMUST00000118711 749 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm13013-201ENSMUST00000119087 523 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm29474-201ENSMUST00000187688 379 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm8419-201ENSMUST00000189886 412 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm37235-201ENSMUST00000195171 59 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.55□□□□□ -1.52
H2afb2S4R1M3 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm14472-201ENSMUST00000119815 282 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm16016-201ENSMUST00000120831 550 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Mir6244-201ENSMUST00000184156 117 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm37308-201ENSMUST00000194684 100 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm7733-201ENSMUST00000199038 919 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H2afb2S4R1M3 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H2afb2S4R1M3 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms