Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm16007-201ENSMUST00000117837 286 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm6884-201ENSMUST00000119318 615 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm12488-201ENSMUST00000122449 499 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm25826-201ENSMUST00000157090 137 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr331-202ENSMUST00000170501 957 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm37308-201ENSMUST00000194684 100 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm4602-201ENSMUST00000203198 308 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm45082-201ENSMUST00000206082 601 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm18996-201ENSMUST00000214851 755 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm18413-201ENSMUST00000221573 655 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm9269-201ENSMUST00000221661 578 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm7808-201ENSMUST00000082002 387 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdc40Q9DC48 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm23280-201ENSMUST00000157905 139 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm23224-201ENSMUST00000158122 271 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm24303-201ENSMUST00000178237 126 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm2058-201ENSMUST00000178791 560 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm8523-201ENSMUST00000211386 552 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm6562-201ENSMUST00000221903 464 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm23737-201ENSMUST00000082547 159 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdc40Q9DC48 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms