Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm15400-201ENSMUST00000118944 601 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm11617-201ENSMUST00000119609 639 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm12731-201ENSMUST00000120932 268 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm13593-201ENSMUST00000121329 692 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm8761-201ENSMUST00000121507 955 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm12518-201ENSMUST00000122075 779 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm22492-201ENSMUST00000157192 297 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm22650-201ENSMUST00000175138 105 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm2539-203ENSMUST00000181352 746 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm27762-201ENSMUST00000183417 109 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm21742-201ENSMUST00000189352 548 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm43501-201ENSMUST00000202513 107 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm44432-201ENSMUST00000203342 938 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm44091-201ENSMUST00000205212 649 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm7443-201ENSMUST00000206355 378 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm45596-201ENSMUST00000209279 434 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm7042-201ENSMUST00000223027 384 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm8526-201ENSMUST00000079153 475 ntBASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Brf1Q8CFK2 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Snord65-201ENSMUST00000104269 72 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm16007-201ENSMUST00000117837 286 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm9440-201ENSMUST00000119667 539 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm11227-201ENSMUST00000119774 471 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm15801-201ENSMUST00000120920 522 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm11848-201ENSMUST00000121207 973 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm8783-201ENSMUST00000159764 522 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm25246-201ENSMUST00000175476 69 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm24957-201ENSMUST00000179604 132 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm27210-201ENSMUST00000184263 402 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr1055-202ENSMUST00000188023 939 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm19060-201ENSMUST00000201959 421 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm42646-201ENSMUST00000202233 914 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm44162-201ENSMUST00000203543 544 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm5582-201ENSMUST00000075251 522 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Brf1Q8CFK2 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms