Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm25793-201ENSMUST00000083287 107 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm15182-201ENSMUST00000120832 1676 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.73□□□□□ -1.17
Trim47Q8C0E3 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm25760-201ENSMUST00000103989 132 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm25093-201ENSMUST00000103993 132 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm15266-201ENSMUST00000119635 255 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm7071-201ENSMUST00000120458 462 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm15242-201ENSMUST00000122459 283 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm14349-201ENSMUST00000137155 902 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm25556-201ENSMUST00000158077 144 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm24939-201ENSMUST00000158325 137 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm18522-201ENSMUST00000173947 650 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm15257-201ENSMUST00000177680 883 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm15252-201ENSMUST00000177750 883 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm23269-201ENSMUST00000178701 107 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm4956-202ENSMUST00000178869 672 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm15260-201ENSMUST00000179402 883 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm27972-201ENSMUST00000184720 137 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm27964-201ENSMUST00000185195 62 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm29534-201ENSMUST00000187328 382 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm18752-201ENSMUST00000192876 608 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm37193-201ENSMUST00000193087 513 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm44342-201ENSMUST00000196874 129 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm44383-201ENSMUST00000198940 129 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm44465-201ENSMUST00000199536 114 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm19147-201ENSMUST00000199622 652 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm43276-201ENSMUST00000199712 364 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm44058-201ENSMUST00000204335 467 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm45279-201ENSMUST00000210315 391 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm46231-201ENSMUST00000220152 314 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm5436-201ENSMUST00000058103 643 ntBASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim47Q8C0E3 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Trim47Q8C0E3 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.71□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms