Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm11677-201ENSMUST00000121349 977 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm23211-201ENSMUST00000122717 308 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.16□□□□□ -1.42
NcanP55066 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.16□□□□□ -1.42
NcanP55066 Mir7658-201ENSMUST00000184043 57 ntBASIC6.16□□□□□ -1.42
NcanP55066 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm37421-201ENSMUST00000193088 132 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm17951-201ENSMUST00000198536 496 ntBASIC6.16□□□□□ -1.42
NcanP55066 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NcanP55066 Gm42459-201ENSMUST00000199679 742 ntBASIC6.16□□□□□ -1.42
NcanP55066 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm43973-201ENSMUST00000203562 210 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm44539-201ENSMUST00000206010 238 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm45359-201ENSMUST00000210635 427 ntBASIC6.16□□□□□ -1.42
NcanP55066 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.16□□□□□ -1.42
NcanP55066 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.16□□□□□ -1.42
NcanP55066 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NcanP55066 Mir193a-201ENSMUST00000083461 66 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.16□□□□□ -1.42
NcanP55066 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NcanP55066 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.16□□□□□ -1.42
NcanP55066 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NcanP55066 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NcanP55066 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NcanP55066 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NcanP55066 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.15□□□□□ -1.42
NcanP55066 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NcanP55066 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Gm6427-201ENSMUST00000118721 979 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm12807-201ENSMUST00000121546 962 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm15096-201ENSMUST00000121918 878 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm17046-201ENSMUST00000168078 850 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 V1rg10-201ENSMUST00000183378 937 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm28503-201ENSMUST00000185966 147 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm3145-201ENSMUST00000188584 220 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm18468-201ENSMUST00000207321 369 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm18470-201ENSMUST00000207467 420 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm18465-201ENSMUST00000207468 369 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm18464-201ENSMUST00000207803 420 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm18458-201ENSMUST00000207908 369 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm18461-201ENSMUST00000208421 420 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.15□□□□□ -1.42
NcanP55066 Gm45405-201ENSMUST00000211544 609 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.15□□□□□ -1.42
NcanP55066 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NcanP55066 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.15□□□□□ -1.42
NcanP55066 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.15□□□□□ -1.42
NcanP55066 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.15□□□□□ -1.42
NcanP55066 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.15□□□□□ -1.42
NcanP55066 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Gm23795-201ENSMUST00000084006 137 ntBASIC6.15□□□□□ -1.42
NcanP55066 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NcanP55066 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NcanP55066 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
NcanP55066 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
NcanP55066 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
NcanP55066 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NcanP55066 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
NcanP55066 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
NcanP55066 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
NcanP55066 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NcanP55066 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
NcanP55066 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
NcanP55066 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.15□□□□□ -1.43
NcanP55066 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
NcanP55066 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.14□□□□□ -1.43
NcanP55066 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.14□□□□□ -1.43
NcanP55066 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.14□□□□□ -1.43
NcanP55066 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NcanP55066 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.14□□□□□ -1.43
NcanP55066 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms