Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox3P53784 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox3P53784 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.5□□□□□ -1.53
Sox3P53784 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox3P53784 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Gm12077-201ENSMUST00000117049 364 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm8595-201ENSMUST00000118250 630 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm11909-201ENSMUST00000121424 759 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.49□□□□□ -1.53
Sox3P53784 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sox3P53784 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm18444-201ENSMUST00000191239 629 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm43743-202ENSMUST00000198353 491 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm31211-201ENSMUST00000199170 253 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm45008-201ENSMUST00000206420 493 ntBASIC5.49□□□□□ -1.53
Sox3P53784 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.49□□□□□ -1.53
Sox3P53784 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox3P53784 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox3P53784 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm7808-201ENSMUST00000082002 387 ntBASIC5.49□□□□□ -1.53
Sox3P53784 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox3P53784 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.49□□□□□ -1.53
Sox3P53784 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox3P53784 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
Sox3P53784 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sox3P53784 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox3P53784 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Sox3P53784 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 Mir449c-201ENSMUST00000102192 109 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Sox3P53784 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.48□□□□□ -1.53
Sox3P53784 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Gm24239-201ENSMUST00000157791 255 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm27820-201ENSMUST00000183628 175 ntBASIC5.48□□□□□ -1.53
Sox3P53784 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.48□□□□□ -1.53
Sox3P53784 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.48□□□□□ -1.53
Sox3P53784 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.48□□□□□ -1.53
Sox3P53784 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
Sox3P53784 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox3P53784 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.47□□□□□ -1.53
Sox3P53784 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Sox3P53784 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox3P53784 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms