Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Col18a1P39061 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm22488-201ENSMUST00000116811 127 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm12757-201ENSMUST00000119465 800 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm7079-201ENSMUST00000119726 171 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Col18a1P39061 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC7.74□□□□□ -1.17
Col18a1P39061 Gm37433-201ENSMUST00000192695 678 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm38333-201ENSMUST00000193608 604 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm37441-201ENSMUST00000194430 678 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Mir409-201ENSMUST00000198153 79 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Gm43408-201ENSMUST00000198263 440 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC7.74□□□□□ -1.17
Col18a1P39061 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col18a1P39061 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col18a1P39061 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col18a1P39061 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 AC117769.3-201ENSMUST00000225814 1664 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC7.73□□□□□ -1.17
Col18a1P39061 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Gm4911-201ENSMUST00000119388 945 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 Gm6175-201ENSMUST00000121351 400 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC7.73□□□□□ -1.17
Col18a1P39061 Gm26098-201ENSMUST00000157247 288 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col18a1P39061 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col18a1P39061 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col18a1P39061 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC7.73□□□□□ -1.17
Col18a1P39061 Gm19086-201ENSMUST00000190772 665 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 Gm31306-201ENSMUST00000197517 508 ntBASIC7.73□□□□□ -1.17
Col18a1P39061 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC7.73□□□□□ -1.17
Col18a1P39061 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Col18a1P39061 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col18a1P39061 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col18a1P39061 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm13590-201ENSMUST00000120183 1588 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Klra14-ps-201ENSMUST00000119532 802 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Gm15030-201ENSMUST00000119804 484 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC7.72□□□□□ -1.17
Col18a1P39061 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm23760-201ENSMUST00000158350 116 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC7.72□□□□□ -1.17
Col18a1P39061 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col18a1P39061 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col18a1P39061 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col18a1P39061 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC7.72□□□□□ -1.17
Col18a1P39061 Igkv2-107-201ENSMUST00000196000 313 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Gm42643-201ENSMUST00000200504 279 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.72□□□□□ -1.17
Col18a1P39061 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC7.72□□□□□ -1.17
Col18a1P39061 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 CT030705.1-201ENSMUST00000223971 533 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 AC164297.5-201ENSMUST00000224365 198 ntBASIC7.72□□□□□ -1.17
Col18a1P39061 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col18a1P39061 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms