Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm9435-201ENSMUST00000120379 877 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm15502-201ENSMUST00000121449 208 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm13162-201ENSMUST00000121481 454 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm14847-201ENSMUST00000121978 519 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm22923-201ENSMUST00000174952 110 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm23872-201ENSMUST00000175432 77 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm37492-201ENSMUST00000191948 376 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm6057-201ENSMUST00000195927 314 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm8861-201ENSMUST00000196346 832 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm44494-201ENSMUST00000196760 129 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm43629-201ENSMUST00000201782 704 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm44003-201ENSMUST00000203024 490 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm44214-201ENSMUST00000204153 606 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm45888-201ENSMUST00000212348 1229 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Gm45725-201ENSMUST00000212962 337 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm2754-201ENSMUST00000223383 589 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 AC154849.2-201ENSMUST00000223781 974 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 AC107663.1-201ENSMUST00000224257 468 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.52□□□□□ -1.69
Sdc1P18828 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 AC135292.2-201ENSMUST00000227559 367 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 AC174678.3-201ENSMUST00000227568 362 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm7887-201ENSMUST00000056948 537 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm24919-201ENSMUST00000083020 106 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.52□□□□□ -1.69
Sdc1P18828 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.52□□□□□ -1.69
Sdc1P18828 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Sdc1P18828 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm7312-201ENSMUST00000118798 469 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm13744-201ENSMUST00000118953 850 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm13503-201ENSMUST00000119017 446 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm13463-201ENSMUST00000119020 233 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm12488-201ENSMUST00000122449 499 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm25291-201ENSMUST00000122795 144 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms