Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Gm44776-201ENSMUST00000207212 381 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.58□□□□□ -1.36
Col1a1P11087 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col1a1P11087 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col1a1P11087 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col1a1P11087 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Gm23948-201ENSMUST00000104030 132 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Gm24855-201ENSMUST00000104848 97 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Gm13435-201ENSMUST00000120111 1023 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Gm25271-201ENSMUST00000157273 290 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.57□□□□□ -1.36
Col1a1P11087 Gm45032-201ENSMUST00000205375 520 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.57□□□□□ -1.36
Col1a1P11087 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.57□□□□□ -1.36
Col1a1P11087 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col1a1P11087 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col1a1P11087 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col1a1P11087 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Col1a1P11087 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.57□□□□□ -1.36
Col1a1P11087 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col1a1P11087 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.56□□□□□ -1.36
Col1a1P11087 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.56□□□□□ -1.36
Col1a1P11087 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm24578-201ENSMUST00000103970 129 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Gm16128-201ENSMUST00000117855 626 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm23279-201ENSMUST00000157912 97 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Gm25655-201ENSMUST00000158465 290 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col1a1P11087 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Mir6926-201ENSMUST00000184562 68 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm43524-201ENSMUST00000197278 298 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm18127-201ENSMUST00000208479 725 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col1a1P11087 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col1a1P11087 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col1a1P11087 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col1a1P11087 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.56□□□□□ -1.36
Col1a1P11087 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col1a1P11087 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col1a1P11087 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.56□□□□□ -1.36
Col1a1P11087 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col1a1P11087 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col1a1P11087 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.55□□□□□ -1.36
Col1a1P11087 Gm15754-201ENSMUST00000119191 478 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm11366-201ENSMUST00000119279 429 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm14485-201ENSMUST00000119489 493 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm14620-201ENSMUST00000120656 383 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col1a1P11087 Scarna13-201ENSMUST00000158164 275 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col1a1P11087 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.55□□□□□ -1.36
Col1a1P11087 Mir6943-201ENSMUST00000185186 66 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm28567-201ENSMUST00000190270 693 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm37044-201ENSMUST00000193531 693 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm38369-201ENSMUST00000195101 693 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm18791-201ENSMUST00000204611 726 ntBASIC6.55□□□□□ -1.36
Col1a1P11087 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms