Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm6818-201ENSMUST00000190556 2558 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm14857-201ENSMUST00000117862 3185 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC7.25□□□□□ -1.25
Hoxc9P09633 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm16089-201ENSMUST00000117679 336 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm25383-201ENSMUST00000157810 144 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Mir6400-201ENSMUST00000184870 92 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC7.25□□□□□ -1.25
Hoxc9P09633 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm6362-201ENSMUST00000217686 836 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC7.25□□□□□ -1.25
Hoxc9P09633 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Hoxc9P09633 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Hoxc9P09633 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Hoxc9P09633 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Hoxc9P09633 Mir31-201ENSMUST00000083474 106 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.25□□□□□ -1.25
Hoxc9P09633 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Hoxc9P09633 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm8256-201ENSMUST00000169178 453 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm4845-201ENSMUST00000179202 562 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm45215-201ENSMUST00000206407 395 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 AC134860.4-201ENSMUST00000223592 978 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 AC125405.1-201ENSMUST00000226406 589 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Hoxc9P09633 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Gm44667-201ENSMUST00000207632 3337 ntBASIC7.24□□□□□ -1.25
Hoxc9P09633 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Hoxc9P09633 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm9239-201ENSMUST00000186942 2557 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC7.23□□□□□ -1.25
Hoxc9P09633 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm44660-201ENSMUST00000207134 2465 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm11270-201ENSMUST00000117685 471 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm11987-201ENSMUST00000118524 381 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm25176-201ENSMUST00000122640 125 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm17086-201ENSMUST00000171346 484 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm26731-201ENSMUST00000180683 543 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm17952-201ENSMUST00000193914 747 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm2053-201ENSMUST00000195671 631 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm44108-201ENSMUST00000203525 422 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm45733-201ENSMUST00000212988 437 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 CT025665.1-201ENSMUST00000215251 1199 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 AC124549.1-201ENSMUST00000225912 333 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm24706-201ENSMUST00000082806 137 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gm37846-201ENSMUST00000191840 3774 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC7.23□□□□□ -1.25
Hoxc9P09633 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.23□□□□□ -1.25
Hoxc9P09633 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hoxc9P09633 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hoxc9P09633 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hoxc9P09633 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Hoxc9P09633 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms