Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm26923-201ENSMUST00000182615 996 ntBASIC3.43□□□□□ -1.86
P06320 Vis1-201ENSMUST00000183957 201 ntBASIC3.43□□□□□ -1.86
P06320 Mir7029-201ENSMUST00000184777 61 ntBASIC3.43□□□□□ -1.86
P06320 Gm29464-201ENSMUST00000187692 513 ntBASIC3.43□□□□□ -1.86
P06320 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC3.43□□□□□ -1.86
P06320 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm8419-201ENSMUST00000189886 412 ntBASIC3.43□□□□□ -1.86
P06320 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC3.43□□□□□ -1.86
P06320 Gm37444-201ENSMUST00000193605 439 ntBASIC3.43□□□□□ -1.86
P06320 AC122844.1-201ENSMUST00000195971 107 ntBASIC3.43□□□□□ -1.86
P06320 Trav3n-2-201ENSMUST00000197693 334 ntBASIC3.43□□□□□ -1.86
P06320 Trav3d-2-201ENSMUST00000199874 334 ntBASIC3.43□□□□□ -1.86
P06320 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC3.43□□□□□ -1.86
P06320 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC3.43□□□□□ -1.86
P06320 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC3.43□□□□□ -1.86
P06320 AC161256.1-201ENSMUST00000217312 213 ntBASIC3.43□□□□□ -1.86
P06320 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC3.43□□□□□ -1.86
P06320 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC3.43□□□□□ -1.86
P06320 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.43□□□□□ -1.86
P06320 AV026068-220ENSMUST00000224153 1147 ntBASIC3.43□□□□□ -1.86
P06320 CU062626.1-201ENSMUST00000225248 505 ntBASIC3.43□□□□□ -1.86
P06320 AC131178.1-201ENSMUST00000228649 492 ntBASIC3.43□□□□□ -1.86
P06320 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm23511-201ENSMUST00000083084 164 ntBASIC3.43□□□□□ -1.86
P06320 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
P06320 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm43784-201ENSMUST00000202922 2436 ntBASIC3.43□□□□□ -1.86
P06320 Gm43258-201ENSMUST00000200312 1950 ntBASIC3.43□□□□□ -1.86
P06320 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
P06320 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC3.43□□□□□ -1.86
P06320 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
P06320 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
P06320 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
P06320 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
P06320 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
P06320 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
P06320 Abcc2-202ENSMUST00000099413 1926 ntBASIC3.42□□□□□ -1.86
P06320 Gm42548-201ENSMUST00000202669 3933 ntBASIC3.42□□□□□ -1.86
P06320 Gm38101-201ENSMUST00000193484 3557 ntBASIC3.42□□□□□ -1.86
P06320 Gm43612-201ENSMUST00000196087 3207 ntBASIC3.42□□□□□ -1.86
P06320 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
P06320 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
P06320 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm37051-201ENSMUST00000194535 2943 ntBASIC3.42□□□□□ -1.86
P06320 Gm14976-201ENSMUST00000117055 1394 ntBASIC3.42□□□□□ -1.86
P06320 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
P06320 Gm44829-201ENSMUST00000208008 3193 ntBASIC3.42□□□□□ -1.86
P06320 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC3.42□□□□□ -1.86
P06320 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
P06320 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
P06320 Gm9506-201ENSMUST00000118516 320 ntBASIC3.42□□□□□ -1.86
P06320 Gm11313-201ENSMUST00000118779 432 ntBASIC3.42□□□□□ -1.86
P06320 Gm11742-201ENSMUST00000119903 233 ntBASIC3.42□□□□□ -1.86
P06320 Gm15034-201ENSMUST00000120043 349 ntBASIC3.42□□□□□ -1.86
P06320 Gm14054-201ENSMUST00000120744 704 ntBASIC3.42□□□□□ -1.86
P06320 Gm13899-201ENSMUST00000121519 1255 ntBASIC3.42□□□□□ -1.86
P06320 Gm15237-201ENSMUST00000122104 469 ntBASIC3.42□□□□□ -1.86
P06320 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC3.42□□□□□ -1.86
P06320 Gm26106-201ENSMUST00000157254 228 ntBASIC3.42□□□□□ -1.86
P06320 Gm25904-201ENSMUST00000158491 143 ntBASIC3.42□□□□□ -1.86
P06320 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC3.42□□□□□ -1.86
P06320 Gm20545-201ENSMUST00000174739 210 ntBASIC3.42□□□□□ -1.86
P06320 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Mir6992-201ENSMUST00000183342 109 ntBASIC3.42□□□□□ -1.86
P06320 Mir6412-201ENSMUST00000184477 97 ntBASIC3.42□□□□□ -1.86
P06320 Gm27781-201ENSMUST00000185185 92 ntBASIC3.42□□□□□ -1.86
P06320 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC3.42□□□□□ -1.86
P06320 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC3.42□□□□□ -1.86
P06320 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
P06320 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC3.42□□□□□ -1.86
P06320 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC3.42□□□□□ -1.86
P06320 Ighv5-3-201ENSMUST00000195336 322 ntBASIC3.42□□□□□ -1.86
P06320 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
P06320 Gm19764-201ENSMUST00000203630 649 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms