Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm15242-201ENSMUST00000122459 283 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm11545-201ENSMUST00000146507 375 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm25898-201ENSMUST00000158303 106 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm22523-201ENSMUST00000158696 100 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm24176-201ENSMUST00000158928 121 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm7418-201ENSMUST00000162120 801 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm27225-201ENSMUST00000183833 557 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Mir7j-201ENSMUST00000184427 122 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28542-201ENSMUST00000185545 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28185-201ENSMUST00000186815 694 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29659-201ENSMUST00000187063 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28682-201ENSMUST00000187430 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28738-201ENSMUST00000187480 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29319-201ENSMUST00000188060 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29312-201ENSMUST00000188724 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29637-201ENSMUST00000188877 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm29181-201ENSMUST00000191288 696 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm2622-201ENSMUST00000200018 471 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm8748-201ENSMUST00000211125 587 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm19116-201ENSMUST00000218592 642 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm3678-201ENSMUST00000218888 492 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm2544-201ENSMUST00000222702 756 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr192-201ENSMUST00000080251 925 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm23970-201ENSMUST00000083319 107 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Gm24451-201ENSMUST00000083353 133 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh1F7BJK1 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh1F7BJK1 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm24173-201ENSMUST00000104130 128 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm12985-201ENSMUST00000118376 183 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm13338-201ENSMUST00000120235 361 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm13508-201ENSMUST00000121639 775 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm13642-201ENSMUST00000121697 381 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm17205-201ENSMUST00000168370 1207 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm19280-201ENSMUST00000190191 205 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm37550-201ENSMUST00000193230 463 ntBASIC5.89□□□□□ -1.47
Pcdh1F7BJK1 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms