Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm14995-201ENSMUST00000117135 391 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Col6a3E9PWQ3 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm14620-201ENSMUST00000120656 383 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm24998-201ENSMUST00000157908 89 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm22154-201ENSMUST00000083844 131 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm22119-201ENSMUST00000175594 99 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm7634-201ENSMUST00000185778 553 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm9309-201ENSMUST00000223537 546 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm23508-201ENSMUST00000083079 72 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm23099-201ENSMUST00000083454 139 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm37120-201ENSMUST00000193350 5959 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm12422-201ENSMUST00000121431 302 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col6a3E9PWQ3 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm43769-201ENSMUST00000201871 4323 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col6a3E9PWQ3 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms