Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm45477-201ENSMUST00000200213 5498 ntBASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Col4a6B1AVK5 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm11912-201ENSMUST00000117235 264 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm13491-201ENSMUST00000118267 235 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm15803-201ENSMUST00000120118 394 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Olfr331-202ENSMUST00000170501 957 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm18100-201ENSMUST00000200897 452 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm44108-201ENSMUST00000203525 422 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm23972-201ENSMUST00000083322 165 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm37040-201ENSMUST00000191740 1824 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm24125-201ENSMUST00000104105 137 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm6081-201ENSMUST00000134472 489 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm3242-201ENSMUST00000171273 485 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm43408-201ENSMUST00000198263 440 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm44776-201ENSMUST00000207212 381 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col4a6B1AVK5 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm17223-201ENSMUST00000171413 481 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm42776-201ENSMUST00000198031 406 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm18127-201ENSMUST00000208479 725 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm2099-201ENSMUST00000220979 412 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Gm4822-201ENSMUST00000077551 479 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms