Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm5538W4VSP6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm5538W4VSP6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Mir2861-201ENSMUST00000175539 82 ntBASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm5538W4VSP6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm5538W4VSP6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Gm10653-202ENSMUST00000139570 835 ntBASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.21■□□□□ 0.51
Gm5538W4VSP6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm5538W4VSP6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm5538W4VSP6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.19■□□□□ 0.5
Gm5538W4VSP6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm5538W4VSP6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm5538W4VSP6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms