Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn9Q9Z0S7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldn9Q9Z0S7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Cldn9Q9Z0S7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldn9Q9Z0S7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn9Q9Z0S7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cldn9Q9Z0S7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.17■□□□□ 0.34
Cldn9Q9Z0S7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Flg-201ENSMUST00000050758 1488 ntBASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn9Q9Z0S7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms