Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnfsf13bQ9WU72 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Gm29791-202ENSMUST00000207888 369 ntBASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnfsf13bQ9WU72 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfsf13bQ9WU72 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Gm4974-201ENSMUST00000209974 875 ntBASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfsf13bQ9WU72 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf13bQ9WU72 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf13bQ9WU72 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf13bQ9WU72 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tnfsf13bQ9WU72 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfsf13bQ9WU72 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfsf13bQ9WU72 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Tnfsf13bQ9WU72 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.31■□□□□ 0.68
Tnfsf13bQ9WU72 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnfsf13bQ9WU72 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfsf13bQ9WU72 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms