Protein–RNA interactions for Protein: Q9QZS0

Col4a3, Collagen alpha-3(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3Q9QZS0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.43■□□□□ 0.7
Col4a3Q9QZS0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col4a3Q9QZS0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col4a3Q9QZS0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col4a3Q9QZS0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a3Q9QZS0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Gm18032-201ENSMUST00000222541 538 ntBASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Idnk-204ENSMUST00000226010 1898 ntBASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Col4a3Q9QZS0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a3Q9QZS0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a3Q9QZS0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Col4a3Q9QZS0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a3Q9QZS0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a3Q9QZS0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a3Q9QZS0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms