Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdzd4Q9QY39 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdzd4Q9QY39 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Gm5643-201ENSMUST00000117081 966 ntBASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdzd4Q9QY39 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Grk6-206ENSMUST00000224995 2971 ntBASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdzd4Q9QY39 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Gm10812-201ENSMUST00000099864 546 ntBASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdzd4Q9QY39 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Flg-201ENSMUST00000050758 1488 ntBASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdzd4Q9QY39 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdzd4Q9QY39 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms