Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Mir6349-201ENSMUST00000184059 97 ntBASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Gm8520-201ENSMUST00000186517 868 ntBASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Nr2e3Q9QXZ7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nr2e3Q9QXZ7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Gm10698-201ENSMUST00000182663 604 ntBASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nr2e3Q9QXZ7 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nr2e3Q9QXZ7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Gm18025-201ENSMUST00000221733 862 ntBASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.17■□□□□ 0.82
Nr2e3Q9QXZ7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Gm22240-201ENSMUST00000175225 82 ntBASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Gm42545-201ENSMUST00000202755 922 ntBASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr2e3Q9QXZ7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Nr2e3Q9QXZ7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms