Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Gm7638-201ENSMUST00000121348 967 ntBASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Gm5587-201ENSMUST00000206270 674 ntBASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn5aQ9JJV9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Gm7791-201ENSMUST00000219066 539 ntBASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Scn5aQ9JJV9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn5aQ9JJV9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Gm10418-201ENSMUST00000100943 576 ntBASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Gm14859-201ENSMUST00000117752 357 ntBASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Scn5aQ9JJV9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Gm9013-201ENSMUST00000132939 882 ntBASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Scn5aQ9JJV9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Scn5aQ9JJV9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Scn5aQ9JJV9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Scn5aQ9JJV9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms